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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|109463536, gi...
Protein type: Globular with Signal Peptide
Type Confidence: 0.87
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAAIAAVAAR RRRSWLSLVL AYLGVCLGIT LAVDRSNFKT CEESSFCKRQ RSIRPGLSPY  60
   61 RALLDTLQLG PDALTVHLTH EVTKVLLVLE LQGLQKNMTR IRIDELEPRR PRYRVPDVLV 120
  121 ADPATARLSI SGRDDNSVEL TVAEGPYKII LTAKPFRLDL LEDRSLLLSV NARGLMAFEH 180
  181 QRAPRVPFSD KVSLTLGSMW DKIKNLFSRQ EPKDAAEGNG AEPEARPGDG DKPEETQEKA 240
  241 EKDEPGAWEE TFKTHSDSKP YGPTSVGLDF SLPGMEHVYG IPEHADSLRL KVTEGGEPYR 300
  301 LYNLDVFQYE LNNPMALYGS VPVLLAHSFH RDLGIFWLNA AETWVDISSN TAGKTLFGKM 360
  361 LDYLQGSGET PQTDIRWMSE SGIVDVFLML GPSVLDVFRQ HASLTGTQAL PPLFSLGYHQ 420
  421 SRWNYRDEAD VLEVDQGFDD HNMPCDVIWL DIEHADGKRY FTWDPTRFPQ PLNMLEHLAS 480
  481 KRRKLVAIVD PHIKVDSGYR VHEELRNHGL YVKTRDGSDY EGWCWPGSAS YPDFTNPQMR 540
  541 AWWANMFNFH NYEGSAPNLF VWNDMNEPSV FNGPEVTMLK DAVHYGGWEH RDIHNIYGLY 600
  601 VHMATADGLI QRSGGIERPF VLSRAFFSGS QRFGAVWTGD NTAEWDHLKI SIPMCLSLAL 660
  661 VGLSFCGADV GGFFKNPEPE LLVRWYQMGA YQPFFRAHAH LDTGRREPWL LASQYQDAIR 720
  721 DALFQRYSLL PFWYTLFYQA HQEGFPVMRP LWVQYPEDMS TFSMEDQFML GDALLIHPVS 780
  781 DAGAHGVQVY LPGEEEVWYD IQSYQKHHGP QTLYLPVTLS SIPVFQRGGT IVPRWMRVRR 840
  841 SSDCMKEDPI TLFVALSAQG TAQGELFLDD GHTFNYQNRH EFLLRRFSFS GNTLVSSSAD 900
  901 PKGHLETPVW IERVVIMGAG KPAAVVLQTK GSPESRLSFQ HDPETSVLTL RKPGVNVASD 960
  961 WSIHLR

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle