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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|197927244, gi...
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.81
Topology Confidence: 0.77
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVWWGSPFLL PILFLASHVG ASVDLTLLAN LRITEPQRFF LTCVSGEAGA GRSSDVWGPP  60
   61 LLLEKDDRIV RTFPPGQPLH LTRNGSHQVT LRGFSKPSDL VGVFSCVGGA GTRRTRVLYV 120
  121 HNSPGAHLFP DKVTHTVNKG DTAVLSARVH KEKQTDVIWK NNGSYFHTLD WHEAHDGRFQ 180
  181 LQLQNVQPPS SGIYSATYLE ASPLGSAFFR LIVRGCEAGR WGPGCVKDCP GCLHGGVCHD 240
  241 HDGECVCPPG FTGTRCEQAC REGRFGQSCQ EQCPGTAGCR GLTFCLPDPY GCSCGSGWRG 300
  301 SQCQEACAPG HFGADCRLQC QCQNGGTCDR FSGCVCPSGW HGVHCEKSDR IPQILNVATE 360
  361 LEFNLGTMPR INCAAAGNPF PVRGSMELRK PDGTMLLSTK AIVEPDRTTA EFEVPRLTLG 420
  421 DSGFWECRVS TSGGQDSRRF KVNVKVPPVP LTAPRLLAKQ SRQLVVSPLV SFGGDGPISS 480
  481 VRLHYRPQDS MITWSAIVVD PSENVTLMNL KPRTGYNVRV QLSRPGEGGE GAWGPSTLMT 540
  541 TDCPEPLLQP WVESWNVEGP DRLRVSWSLP SVPLSGDGFL LRLWDGARGQ ERRENISSPQ 600
  601 ARTALLTGLT PGTHYQLDVR LYHCTLLGPA SPSAHVHLPL SGPPAPRHLR AQALSDSEIR 660
  661 LMWQHPEAPP GPISKYIVEI QVAGGSGDPQ WMDVDKPEET STTVRGLNAS TRYLFRVRAS 720
  721 VQGLGDWSNT VEETTLGNGL QSASPVQESR VAEDGLDQQL VLAVVGSVSA TCLTILAALL 780
  781 ALVCIRRSCL HRRHTFTYQS GSGEETILQF SSGTLTLTRR PKPQPEPLSY PVLEWEDITF 840
  841 EDLIGEGNFG QVIRAMIKKD GLKMNAAIKM LKEYASENDH RDFAGELEVL CKLGHHPNII 900
  901 NLLGACENRG YLYIAIEYAP YGNLLDFLRK SRVLETDPAF AREHGTASTL SSRQLLRFAS 960
  961 DAANGMQYLS EKQFIHRDLA ARNVLVGENL ASKIADFGLS RGEEVYVKKT MGRLPVRWMA1020
 1021 IESLNYSVYT TKSDVWSFGV LLWEIVSLGG TPYCGMTCAE LYEKLPQGYR MEQPRNCDDE1080
 1081 VYELMRQCWR DRPYERPPFA QIALQLGRML EARKAYVNMS LFENFTYAGI DATAEEA

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle