YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|165970703, gi...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.60
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAAPCMSCGR GLSLRLAHAV RANLCQRPGY WTAPAVGWQT GSRSQLLKLI HTTVVTTKKN  60
   61 AQASRQESYT EDFIRKQIEE FNLGKRHLAN MMGEDPETFT EEDIDRAIAY LFPSGLFEKR 120
  121 ARPMMKHPEQ IFPKQRAIQW GEDGRPFHFL FYTGKQSYYS LMHDVYGKVL QLEKHRGPLS 180
  181 ENTESRDLIG SRWLIKEELE EMLVEKLSDQ DYTQFIRLLE KLLTLPCGPA EEDFVQRFRR 240
  241 SVTVQSKKQL IEPVQYDEQG MAFSTSEGRR KSATARVVVY QHGSGKIHVN GVDYLLYFPI 300
  301 LQDREQLMFP FHFLDRLEKH DVTCTVSGGG RSAQAGAIRL AMAKALCSFI TEDEVEWMRQ 360
  361 AGLLTPDPRI RERKKPGQEG ARRKFTWKKR

Type	Start	End	Confidence
Signal Peptide	1	19	0.60
N-region	1	10
H-region	11	16
C-region	17	19
Cleavage Site	19	20
Non-Cytoplasmic	20	390	0.99