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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|149058352, gi...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.47
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKFAEHLSAH ITPEWRKQYI QYEAFKDMLY SAQDQAPSVE VTDEDTVKRY FAKFEEKFFQ  60
   61 TCEKELAKIN TFYSEKLAEA QRRFATLQNE LQSSLDAQKE STGVTTLRQR RKPVFHLSHE 120
  121 ERVQHRNIKD LKLAFSEFYL SLILLQNYQN LNFTGFRKIL KKHDKILETS RGADWRVAHV 180
  181 EVAPFYICKK INQLISETEA VVTNELEDGD RQKAMKRLRV PPLGAAQPAP AWTTFRVGLF 240
  241 FGIFIVLNIT LVFAAVFKLE TDRTVWPLIR IYRGGFLLIE FLFLLGINTY GWRQAGVNHV 300
  301 LIFELNPRNN LSHQHLFEIA GFLGILWCLS LLACFFAPIS IIPIYVYPLA LYGFMVFFLI 360
  361 NPTKTFYYKS RFWLLKLLFR VFTAPFHKVG FADFWLADQL NSLSVILMDL EYMICFYSFE 420
  421 LKWDESKGLL PNDPQEPEFC HGYTYGVRAI VQCIPAWLRF IQCLRRYRDT RRAFPHLVNA 480
  481 GKYSTTFFTV TFAALYSTHK ERGHSDTMVF FYLWVVFCII SSCYTLIWDL KMDWGLFDKN 540
  541 AGENTFLREE IVYPQKAYYY CAIVEDVILR FAWTIQISIT ATTFKPHVGD IIATVFAPLE 600
  601 VFRRFVWNFF RLENEHLNNC GEFRAVRDIS VAPLNADDQT LLEQMMDQED GVRNRQKSRS 660
  661 WKYNQSISLR RPRLPSQSKA RDTKVLIEDT DDEANT

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle