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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|109502134, gi...
Protein type: Transmembrane
Type Confidence: 0.83
Topology Confidence: 0.78
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLQLWKVVRP ARQLELHRLI LLLIGFSLVS MAFLAYFVST SPKAKEPLPL PLGDCSSSGA  60
   61 AGPGPARPPV PPRPPRPPET TRTEPVVLVF VESAYSQLGQ EIVAILESSR FRYSTELAPG 120
  121 RGDMPTLTDH THGRYVLVIY ENLLKYVNLD SWSRELLDRY CVEYGVGIIG FFRAHEHSLL 180
  181 SAQLKGFPLF LYSNLGLRDY QVNPSAPLLH LTRPSRLEPG PLPGDDWTIF QSNHSTYEPV 240
  241 LIASHRPAEL PLPGPALRRA RLPTVVQDLG LHDGIQRVLF GHGLSFWLHK LVFVDAVAYL 300
  301 TGKRLCLDLD RYILVDIDDI FVGKEGTRMK VADVEALLTT QNKLRTLVPN FTFNLGFSGK 360
  361 FYHTGTEEED AGDDMLLRHR REFWWFPHMW SHMQPHLFHN RSVLADQMRL NKQFALEHGI 420
  421 PTDLGYAVAP HHSGVYPIHT QLYEAWKSVW GIQVTSTEEY PHLRPARYRR GFIHNGIMVL 480
  481 PRQTCGLFTH TIFYNEYPGG SRELDRSIRG GELFLTVLLN PISVFMTHLS NYGNDRLGLY 540
  541 TFESLVRFLQ CWTRLRLQTL PPVPLAQKYF ELFPQERSPL WQNPCDDKRH KDIWSKEKTC 600
  601 DRLPKFLIVG PQKTGTTAIH FFLSLHPAVT SSFPSPSTFE EIQFFNGPNY HKGIDWYMDF 660
  661 FPVPSNASTD FLFEKSATYF DSEVVPRRGA ALLPRAKIIT VLINPADRAY SWYQHQRAHG 720
  721 DPVALNYTFY QVISASSHAP LLLRSLQSRC LVPGYYSTHL QRWLTYYPSG QLLIMDGQEL 780
  781 RVNPAASMEI IQKFLGITPF LNYTRTLRFD ADKGFWCQGL EGGKTRCLGR SKGRRYPDMD 840
  841 MESRLFLTDF FRTHNLELSK LLSRLGQPAP LWLQEELQHS SVG

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle