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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|66499167
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.96
Topology Confidence: 0.92
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKILIFFLYV TTLLGIVTSD KCAVECSCKW KSGKRTVECV NRALTSIPEW VDPETQVLDT  60
   61 SGNDIRTLPS NIFVRVRLTN LQRLYLRECR IDRIDSEALA GLTNLVELDL SHNLLTVVPT 120
  121 ASFLDTPFLR DLVLSYNPLK RVHSHAFKST PNLVKLDLSH TQLVEIEAKG FRGLDLLESL 180
  181 KLNNNQLSTL HPGTFEPLNK LTSIELHDNP WICDCHLREM KMWLVKHNLP TLQAPLCRGP 240
  241 RQLMNRTFTD LGIDDFACRP ILLIASRYAE ATIGENASIV CRVSAIPPAK VKWYWNGRLL 300
  301 TNHSAFSSYQ KILIFEDGQF RKRSTLVLTN AQEADSSEFY CVAENRAGTV EANFTLHVSL 360
  361 RTAGMSTLGS GHIAGISAAL VVLILFILLV ILVLFVRFRR MPVKDVKSAV PAEGVSGDSA 420
  421 GGNNENNPSS ATSTTRRKHE EIETTSFGVE SKPPPVSLTL SYVQRPQAAL LQTENEYGAS 480
  481 IGRFDDHSQQ PSVMVAPGAC FSSTTSLMPI DNPDLIRDTR RGSAEDITPY GGADYSRMEV 540
  541 VDDAKILYSS CMWEARDTCR TTVPVSTYPS KETLAVVAPM VEQFPPGAKQ IRVWQKGVPV 600
  601 LPPVSALKRV LGSTRSSPDE GYQEGTGTDV 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle