YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|66514111
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.52
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPFKKDLRLL LKPYYFINIL LSLSYIISKR ISIICNYVFA QAECELDGRE TEILFFLMIV  60
   61 IMIRTRKTGS VTMISYLSSS FVYTKVANLI LWFYADIRMG IIFAIIFILC GLMFPEPTYQ 120
  121 GPEKVTYLRG ANGLQEELYR DTKVIWLVAF YTAWNPACVN FAPIFSELSA EYALENLKFG 180
  181 KIDIGRYPDA ALKYHISDAS TSKQLPTLIL FKEGKEIERR PHVDHKGKLI KFLFSLDNIK 240
  241 AAFDLNNIYR DCKKNPIKKK EKKIVKTE

Type	Start	End	Confidence
Cytoplasmic	1	67	0.52
Transmembrane Helix	68	87	0.52
Non-Cytoplasmic	88	93	0.38
Transmembrane Helix	94	115	0.84
Cytoplasmic	116	268	0.57