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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|85721925, gi|...
Protein type: Transmembrane
Type Confidence: 0.65
Topology Confidence: 0.55
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTAISSEAKV GLFVLVGLII LGYMSFRVGQ QGFGLKKGYR VEVAFDNVSG LEKDASVQIA  60
   61 GVEMGRVESI RLKDGKAMVT LRINPDVKLE RDVMASIKTH GVLGDKYIEL SPGTKGEGYI 120
  121 APGGQIAVAE RAADIDRLLQ QFALIADDVK AVSGALSKVL GGQAGEESIG AIIENTRQLT 180
  181 CNLNKVVLNN EENLRTMLEN TRELTGNLNS MVTRNDENVT QMIESLKSAS REMEKTFAAL 240
  241 SDISEGMKRG EGTMGQLLTD KTMAEKLNRT MTSLESVAEK IDQGKGTIGK LVNEQETVDN 300
  301 LNESLGGINR YVNKAEQFRT FLSYRGEYLF DKSDAKSYLD VRIQPRHDRF YVLGLVNDPR 360
  361 GRRTVKDTTV NGVTTRTEEW DKSELLFNAQ LGKRFRNVVL RGGLFESTGG VGIDYLTLND 420
  421 NLKLTFEAFD FSDDRDAHLK GYAEYRLFKH LYLTAGWDDF ISDEGNRSPF AGLAIRFEDD 480
  481 DLKYLLTSTP IPR

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle