YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|68357320
Protein type:	Globular with Signal Peptide
Type Confidence:	0.98
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKFICLLLLT ACGIKDSRSE QYDVIGAAVA VFASVGDDVI LPCSVKPNIS VVDMIVEWRR  60
   61 SDLKDSLVHL YEDHEDRETE QNESYRGRTQ LIHPELQRGN ASLRLSSVKV SDEGRYKCII 120
  121 GSESSKHEAT VDLTVEALGW APVITIDGFN PSGGLHLQCE SEGWYPEPHL EWLDHEGVSL 180
  181 RPETTETHQK AGMFSIKHTI IVYHSDDKIH CRVKLKHHML EAQIITSQQS VCFQRAASLP 240
  241 AQTKDQQVII KSSLYSIGLL VNMDVSKPKS TSKGATRATG PGSPHKGPPK FKQRSTRQFK 300
  301 SKPPKKGVIG FGEEIPGMEG LGTDFNVICP WEAYSHLELH ELAQYGII

Type	Start	End	Confidence
Signal Peptide	1	19	0.95
N-region	1	10
H-region	11	16
C-region	17	19
Cleavage Site	19	20
Non-Cytoplasmic	20	348	0.99