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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|68363662
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.77
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKRITGKTKE ATLIEMTSAL DSQIEGNNGS INSISDRGIQ LPGHREFAHA VCNTALLEHL  60
   61 MKMMIALTEI DKFDQNRDSV FFKDGVRRID FVLSYVDDKE GDKKAERRRE FEANLEKAGL 120
  121 ELETEDKSES DDRKTHYLKI HAPWEVLATY ADVLKIKVPF KVSDIPKARE VPLEWLSHPF 180
  181 RLPENIMRPE PDYFTAPFDK SKVDFFLIDD KDTFFPPSTR NRIVYYILTR CPYYKEDRKE 240
  241 KDKTGINRLL NNGTYTSAYP LHDCRYWKKA QDMQCESERY HLYRYWARFL CFYKEQPLNL 300
  301 IKKYYGEKIG IYFAWLGFYT EMLFYAAVMG VICFVYGVLS YEDNITSKEI CDPKIGGMIV 360
  361 MCPLCDKKCS YWKLNSTCLS SWQSHLFDNE GTVFFAMFMG IWVTLFLEFW KRRQARLEYE 420
  421 WDLVDFEEEQ QQLQIRPEYE QKCTGRRLNR ITQEMEPYLP FPSKCARFCL SGATVLFWTC 480
  481 LIVACIMGVI AYRLAVYAAF ASVMKDSSTS KIQLVGSLIT PQLATSVTAS CINFVIILIL 540
  541 NFLYEHVAIW ITDMEIPKTH LEYENKLTMK MFMFQFVNYY SSCFYVAFFK GKFVGYPGNY 600
  601 SYMFGKWSTL RNEECAPGGC LIELTTQLLI VMAGKQMVGN VQEALLPLVR NWWSSRKGRS 660
  661 HPESTYSRWE QDHDLQNFSQ FGLFYEYLEM VIQFGFITLF VASFPLAPLL ALFNNILEVR 720
  721 VDAWKFTTQF RRPMAAKARN IGAWEEILNV VAIMSVVTNA FIMAFTSDMI PRLVYLYAYH 780
  781 PGIEANMTGY ITNSLSIYNI SQIPEDNLPE AGENPSWFNS STITTCRYRD YRYPPGHLRQ 840
  841 YTHTMQFWHI LAAKLAFIII MEMLKLSYNK LKLLSRQTLM GLWSLTRLHL DHNRLEFIHP 900
  901 DAFQGLTNLR LLHLEGNQLQ QLHPATFSTF SVLGHFPVST LKHLYLSDNI LTTLSQKMLA 960
  961 SMPYLESLSL HGNPWTCDCR MRWFNEWNKN SQGVLKCKKD KAYPSGQLCP LCFSPKQLKK1020
 1021 KQLQELEKPT CNSPIISISN RAISSEDTES DLLTMDEFRQ PLGNISLGLS DEHGHQVDLE1080
 1081 CLVIEPRELT SIGWDYVNQY QISVNLTLTL DLICGIDRSS YERLWRLIAY YSDVPAHLRR1140
 1141 EIMLSKDPYL SYRYRQDIER DALYFTGVKA NIAANPPWLM QSSMDLQLNR LQSTSKNVRL1200
 1201 ILSTYMTDVM ERETIRKQSQ GWVLIESKND TRTMQAAVVG SPTKINCTVH SSGNESVKWM1260
 1261 LPDGSTIETP YRNSENRLSA SSSGLLEIKS LDHSDSGVYY CIAQVSDDLT VFPFRLTVEE1320
 1321 SSSPPPGGEG ISEPVTRFAG EPFSLPCAAT GSPDADIHWI LPNGSIVNKW LNISRISVAS1380
 1381 NGSLVIQNSQ LSDNGYYKCV AGNQHGMDTL ATKLIISRPP GILALRKYSS SPQPAEGVST1440
 1441 KINILMTNDM ESSGDNEPED FLAKALAKKV EIPNRRRIPN MGIRGGHPSR NSWRHASTPR1500
 1501 RRVGTQVIDR ANTVDSRRRI SMLKNQIDPK HWASILSKVR SGGNDTKATT PNYAQTSTNK1560
 1561 IQESEQNTKQ SEIVNKIEGS SSEFTTTRPP VKDATVSQMP DGATEFNLDI RALDYDNTRH1620
 1621 VIYQIATPET VPNSDLFTDI TQPTVGPQMT RFTVGDSGIS KRVAMSTVWS TTSYGTHLQE1680
 1681 NQSHTMDSGR VTEAIQQFDG KYDVENRVVQ NQEHVGQVYQ RGTDHSLAST TVKSITEPSW1740
 1741 VFRAEEALLS ITQHQKDFNK DQQHCLRAEA DLRLPAQT

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