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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|68370558
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.70
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MHRRNSDPAQ IVSLEKQSVV NGTEGPNMPQ AQRSSVSHCK SNWAPSCNLF GRPVGALSMS  60
   61 SARRGTLNVF GPSGHSQCLR PVGALSMSSA RQGTLNVFGP SGHSQCLRPV GALSMSSARR 120
  121 GTLNVFSPSG HTLNVFGPSG VTPIKPNRAP SRTASPTGLL LAPQAQRGSF SHRKPNGAPS 180
  181 RSASPTGLLL APQAQRGSFS HHKPNGAPSR AASPTGLLLA PQAQWGSFSQ CLRPVVARSK 240
  241 CLRPVGARSE GLLALCHLYR AQARFRIVGE VIATKLNPTV LPFWGWLRPA FIFRQDLPAH 300
  301 PEFCTIDGAY AKELYERTVT LRKFPSILPI TTTTRLASSP LRGAEAHRFT GPNRKMNASQ 360
  361 QIHVFSSHWK VESVIISLIF SMIFLVGTVG NCLVLAVLIR NGQMNTKSTN LFILNLGLAD 420
  421 LCFIVFCVPL QATIYTMDEW VFGAFVCKAV HFIIYLTMYA SIFTLAAVSL DRYLAIRYPL 480
  481 RSRETRTPRN ALTSISLVWA LSLFFSSPYL SYYQQMDLDG TTVCIPAWSV HHRQAMDICT 540
  541 FIFGYLIPVL ILGITYARTI RYLWTSVDPM QDMSESRKAK RKVTKMIIIV AVLFCLCWLP 600
  601 HHLVILCMWF GHFPLNHTTY VLRILSHLVA YANSCLNPIV YALVSKHFRK GFKKVFGCAF 660
  661 RNRVVNRIHT VQPAQTSIEH VRGVRDQVVL ESSPVVMEEK RWIGGCKGAR LSSISLAVQQ 720
  721 STACSKLITS QGRGRFFIRL MLRRRTLGSV VKHLLHTNRV IEWYCPNISI LRNEELLEPF 780
  781 LSLSMVLSEM DFKISVENCS FLDESWLLPV CQIYEVVPCR ELGIALRYLD GRVFVLDLLQ 840
  841 GSQAQVDMFA EPGDIIDEIN GISLRNASNG QATHFSPPKA GVVLSKLKGQ PLSIHFIRWR 900
  901 GEDGSIYQPL VKHLRQLEQE KPSLQFGPKP ASQQDKTTAA QKKSQTQCVK DGRILYAVDL 960
  961 LGKANIGMYG GKEVLQHAIP VVLESKQTRK EVLLDVKETH LTCIDKSTKQ ELFQHHFPEI1020
 1021 SCVGRFGSQP DLTIFAFCVL DAPQADKPAG FCCVVLQAAN CSECEEIVNR IGE

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle