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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|86554855, gi|...
Protein type: Transmembrane
Type Confidence: 0.62
Topology Confidence: 0.57
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MHRELWAVGK TVGLVDPPGL AFWLLGSLFL ALLLLGVSLG ESQLLSVFRG ILGSLSRRFP  60
   61 FQPPRGTPSP EARFRAALEA SLDAIYLLEA VRDPVTREIL DFVFVDVNAK GEELISLQRR 120
  121 QIIGQRLCEL LPINRWGGFF EKYKRVVETG IPLEEEFPIS GQPGLKASWI HHQVVPVGDG 180
  181 ILITSRDISE QVQIKQALEA SELRYRALYE AIPDLIFEID PEGLILNCKP SPYVPTQHPP 240
  241 EFCVGRRAQD VFPSSFGEQY QLLAGRALST QTPQYLEYEM VLPAAAANES EPAIRRYQKA 300
  301 CVVAYGRDRV YVLVRDITKR KEAELALREM EATQRAILQA IPDLILRLNS QGICLSSIPG 360
  361 GDVHLCCPAE RHLGRSLQEI LPPALAEQRL FYVQQALATQ TQQRYEYSIE VQGEVRHEEA 420
  421 RIVPLNSQEV LVIVRDITEA KQAELALKAA EQLQRAILEA IPDLIFRLDS QGICLSFISG 480
  481 GEVLLYGSPD TYVGRSLQEL LPPELAERRL FFVQQAIATQ TRQRYDQSIE IEGETRHEEV 540
  541 RIVPLNPQEV VVIVRDVTDR VRSQQAVQES EQKFRALFEN AAVAILIRHA ETGEILEANS 600
  601 QAIAAYGFSS LEELRAFDAC EQSPYRRALQ GREFALQPYL EQARQQGSAR FEWQWQRQDG 660
  661 RVVWEDVFVQ PLVLRGIPCW VFTAVDITAR KSAEAELEQF FSVALDLLCI ADAQGYFRRL 720
  721 NRAWETTLGY SLQELQSRPF LEWVHPEDVP ATQAAMQQLV EEKRLDHFVN RYRTQDGSYR 780
  781 FIEWRASLAG SLVYAAGRDI TLAKQAQEQM KAAMEAAEAA NRAKSEFLAT ISHEIRTPIN 840
  841 AIMGMAGLLL DTSLDAQQRD WVQTIRYGSE VLLSLINDIL DFSKIESQKL ELEETPFSLP 900
  901 QLMEELLDLM AAQAQSKDLE LVAWVDPALP ATLVGDPNRL RQILANLLSN AIKFTPQGEV 960
  961 VVTVEAQEQD PQAQVQWVSF QVQDTGIGIP PEKQDRLFKP FSQVDSSISR QYGGTGLGLA1020
 1021 ISQRLCQLMG GTIWVQSQPG QGSTFGFRIP LKLPDAALWA TPTPDPALAG QRVLLVEDNA1080
 1081 SQRQLLARLL QSWGMQVTAC STVAEAQAIA KAQTFELALV DTSLPDGDGL ALARALQQEQ1140
 1141 PPLRLVLLVD RRAALASAGS LPALGKPVRA SQLRALLGQE KVPAAASHLK PQLPLASRCP1200
 1201 LRILVAEDNP VNQKVIRLML ERLGYQPDIV ANGLEALQAL QLRAYDLVLM DLHMPELDGL1260
 1261 AATRRIRSEL PPERQPRILA LTADAFLESR AAAEAAGVDG YLTKPLQPAV LERALQEAAL1320
 1321 DFVGDPKPEP ALDAAALASL QSMLGSPEDW QEMIQTYRQD SQALLGSLRQ ALESRDVQTV1380
 1381 AQLAHRLKGS SRTLGAKLLA QRCQALEKLV RKPSANSVNW DTIEQAFQRL EAEYQRVILE1440
 1441 LSASAPGPLL SSPGAHAEA

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle