YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|86606377, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.90
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTVARQNPTP SAQQERDPRL KEIDTLTLKQ WLDQGRVQLI DVREPGEYAD ERIPGAINMP  60
   61 LSSFDPARVP ASTPEKPVVL QCRMGSRSIR AACQLLDHGW PEVLSLKGGI EAWKAAKLPT 120
  121 TRTRNAPISL MRQVQIAAGS LVLTGTLLGA FVNPWWLLLS GFVGAGLVFA GVTNTCGMAL 180
  181 LLARMPWNRG QAL

Type	Start	End	Confidence
Cytoplasmic	1	133	0.98
Transmembrane Helix	134	152	0.93
Non-Cytoplasmic	153	161	0.61
Transmembrane Helix	162	183	0.92
Cytoplasmic	184	193	0.90