YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|86555900, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.63
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTRLLRQTFL AMALFGGGIA YGVWLSSPRG QAWLQQTPLA TWSQRAGEGV GSLLPWSESP  60
   61 PESASPADAV RPSNFIAAVA QKVGPAVVRI DATRTVASPI DPELFNQPLF RRFFGGQIPQ 120
  121 LPQEFQQEGT GSGFIIDPNG LILTNAHVVE GSERVRVHLL DGRTFEGKVK GSDPVTDIAV 180
  181 IQIEGENLPT VTLGNSDQVR PGDWAIAIGN PLGLDNTVTA GIISAVGRSS GQIGATNKRV 240
  241 TFLQTDAAIN PGNSGGPLLD AEGRVIGVNT AIFQRAQGVG FAIPINRAME IAEQLIRNGR 300
  301 VEHAFLGIRM ITLNPDLVER LNRDPGRSTT LTVQEGVLIG QVIPGSPAEQ AGLREGDVIV 360
  361 EIDGQPIRDA EQVQQLVDAT GVGKTLTLRV IRDGQARTFQ VKTGVLPVGS

Type	Start	End	Confidence
Signal Peptide	1	22	0.62
N-region	1	13
H-region	14	19
C-region	20	22
Cleavage Site	22	23
Non-Cytoplasmic	23	410	0.99