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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|86556049, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.72
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNKPLSPQRW LIALLLGFCL WQGSGLVLQP APAHAALASA LTYDRFLRYV EEGRVTDVRL  60
   61 TDNNLVAEVT AVDPQTQHST RYRVNLLPNT VPQLVDRLTE QGIEVAVVPT RNGSAFWALL 120
  121 GNLVIPLLLL GGLFFFLRRA GGGAGGPGQA MNFGKSRARF QMEAKTGVKF DDVAGIEEAK 180
  181 EELQEVVTFL KKPERFTAVG AKIPKGVLLV GPPGTGKTLL AKAIAGEAGV PFFSLSGSEF 240
  241 VEMFVGVGAS RVRDLFKKAK ENAPCIVFID EIDAVGRQRG AGIGGGNDER EQTLNQLLTE 300
  301 MDGFEGNTGI IVIAATNRPD VLDAALLRPG RFDRQITVDR PSFKGRYEIL RVHARNKKLA 360
  361 EEVSLEAIAR RTPGFAGADL ANLLNEAAIL AARRQRMAIT NQDIEDAIDR ITIGLTKPPL 420
  421 LDGKSKRLIA YHECGHALLM TLLPHADPLN KVTIIPRSGG AGGFAQQLPN EEQIDSGMYS 480
  481 RAWLLDRVVV GFGGRAAEEI VFGYSEVTTG ASNDLQQNTN LVRQMVTRFG MSELGPLMLD 540
  541 PPNNEVFLGG GWMNRVEYSE DVAAKIDRQV RQILESCYQK AKQILLEHRP LLDRLADTLV 600
  601 ERETLDGDEF RAIVSEYVPI PEKVGLPSPF PEAGRSPKLV 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle