YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|86608125
Protein type:	Globular with Signal Peptide
Type Confidence:	0.87
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MARILRHTLL AMALFGGGVA GGVWLSSRAG QEWLQQTPLI TWTRRASEGV GSLLPWSEPR  60
   61 PEAANSAPPA DAVRPSNFIA AVAQKVGPAV VRIDATRTVS RGVNPELFNQ PLFRRFFGNQ 120
  121 IPQLPQEFQQ EGTGSGFIID ASGLILTNAH VVEGSERVRV HLLDGRTFEG EVKGSDPVTD 180
  181 IAVIKIEGEN LPTVTLGNSD LVRPGDWAIA IGNPLGLDNT VTAGIISAVG RSSGQIGAVN 240
  241 KRVTFLQTDA AINPGNSGGP LLDAEGRVIG VNTAIFQRAQ SVGFAIPINR AMEIAEQLIR 300
  301 NGRVEHAFLG IRMITLNPDI VARLNRDPAR PTTLTVEEGV LIGQVIPGSP AEEIGLREGD 360
  361 VITEINGQAI HDAEQVQQLV EAAGVGNTLT LRVIRDGQAR TFQVKTGVLP VDF

Type	Start	End	Confidence
Signal Peptide	1	21	0.87
N-region	1	12
H-region	13	18
C-region	19	21
Cleavage Site	21	22
Non-Cytoplasmic	22	413	0.99