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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|58826317
Protein type: Transmembrane
Type Confidence: 0.76
Topology Confidence: 0.53
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MESEASSFES SETLAALVAS TPLLEESWKV CGVADASVDS NFAVNRVGGT AYVGFSGVKL  60
   61 GAGVDQSCRN LVPLPDELFS SLCLDGADPA MVHAGLLQLF QSVYSDNLFR DQMVEIMNTS 120
  121 KSIVITGHSI GGAIASLLTL WLLCRLQTIC SVICITFGSP MLGNESFSRV ILQKRWAGHF 180
  181 CHVVSQHDIV PRLFFSPSCS FQFISEENKT QLFRVVLDSL GVVSRGECKS SFCPSGSYLF 240
  241 CTNNGAVCVD NGMVVIKLLY LTLLNGSQSS SLEDHLGYAD FIRKVQWQFI ENRSFMGGNI 300
  301 PESSYEAGIT LALESLGIAS HELNSEDAKE ALKKAKKLGR TRNLNSANLA IGLSKINPFR 360
  361 AQIEWYKASC DNSVEQMGYY DSFKQRGASR RGFKVNMNRI KLGQFWDSLI DKLEANELPY 420
  421 DFHKRAKWVN ASQFYKLVVE PLDIAEYYRT GMHLVKGHYM QHGRERRYKI FDKWWNTENG 480
  481 TDHPTARSRF ASSTQDSCFW AQVEEARDSL IKVRAEGDAR MFIKMLEDVT KFDQYAKRLI 540
  541 ENKEVSQDVL AKNSSYTKFI EEWKDFQSQL QLLQPQFP

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle