YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|70728588, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSLTVIAQRI GTTSFQRLMI GLALSSLLVG CSSTKSSSVG VVERSNTVAP QRPTVTTGQY  60
   61 AVRRGDTLFS IAFRYGWDYK ALAARNNIAE PYTIHPGQVI RFDGRTGTTP ATVVTSTQSS 120
  121 ASSSSKTTVI RRPAGTTTTP ATATTTNPAS KPAPAPATPA GPAPTGWGWP SNGVLIGKFS 180
  181 SNGSLNKGID IAGDLGQPVL AASDGTVVYA GSGLRGYGEL VIIKHNETYV SAYGHNRKLL 240
  241 VREGQQVKVG QTIAEMGSTG TDRVKLHFEI RRQGKPVDPL QFLPRR

Type	Start	End	Confidence
Signal Peptide	1	36	0.95
N-region	1	27
H-region	28	33
C-region	34	36
Cleavage Site	36	37
Non-Cytoplasmic	37	286	0.99