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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: OPGH_PSEF5
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.71
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSNSQLQPES LAEYLAHLPM SDQQRAELAG CQSFSELHQR LSSSTFDGPT DAAQASVGQR  60
   61 LTLSTAAELE EAEMLAVDAE GRVCLKATPP IRRTKVVPEP WRTNILVRGW RRLTGRTNPP 120
  121 APKKDERVLP AARWRTVGSI RRYILLVLML GQTIVAGWYM KGIMPYQGWS FVDLEEVMHQ 180
  181 PLMQTAQQVL PYALQTSILI LFGILFCWVS AGFWTALMGF LELLTGHDKY RISGASAGNE 240
  241 PIPKDARTAL VMPICNEDVP RVFAGLRATF ESVAATGDLD RFDFFVLSDS NDSDICVAEQ 300
  301 QAWLDVCREA KGFGKIFYRR RRRRVKRKSG NLDDFCRRWG GDYKYMVVLD ADSVMSGECL 360
  361 TSLVRLMEAT PDAGIIQTAP RASGMDTLYA RMQQFATRVY GPLFTAGLHF WQLGESHYWG 420
  421 HNAIIRMQPF IEHCALAPLP GKGAFAGAIL SHDFVEAALM RRAGWGVWIA YDLPGSYEEL 480
  481 PPNLLDELKR DRRWCHGNLM NFRLFLVKGM HPVHRAVFLT GVMSYLSAPL WFFFLVLSTA 540
  541 LLAVNTLMEP QYFLEPRQLY PLWPQWHPDK AIALFSTTIV LLFLPKLLSI ILIWAKGAKE 600
  601 FGGKFKVTLS MLLEMLFSML LAPVRMIFHT RFVLAAFLGW AATWNSPQRD DDSTPWSEAV 660
  661 KRHGPQTLLG FCWALLVIWL NPSFLWWLVP IVGSLMLSIP VSVISSRVGL GLKSRDESLF 720
  721 LIPEEYAPPQ ALLATDQYTH ENRWHALNDG FVRAVVDPQQ NALACALATS RHTQAEPIEW 780
  781 LRQERVRHAL KVGPAALNNS ERLALLSDPV ALGRLHEQVW SEGHSEWLSA WRQSVDADPH 840
  841 APLLPLQPLN AAPQPA

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle