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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|70734331, gi|...
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.48
Topology Confidence: 0.12
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAKNLILWLI IAAVLVTVMN NFSSPNEPQT LNYSDFIQQV KDGKVERVAV DGYVITGKRN  60
   61 DGDSFKTIRP AIQDNGLIGD LVDNHVVVEG KQPEQQSIWT QLLVASFPIL VIIAVFMFFM 120
  121 RQMQGGAGGK GGPMSFGKSK ARLLSEDQVK TTLADVAGCD EAKEEVGELV EFLRDPGKFQ 180
  181 RLGGRIPRGV LMVGPPGTGK TLLAKAIAGE AKVPFFTISG SDFVEMFVGV GASRVRDMFE 240
  241 QAKKHAPCII FIDEIDAVGR HRGAGMGGGH DEREQTLNQL LVEMDGFEMN DGIIVIAATN 300
  301 RPDVLDPALL RPGRFDRQVV VGLPDIRGRE QILKVHMRKV PMGDDVAPAV IARGTPGFSG 360
  361 ADLANLVNEA SLFAARTGKR IVEMKEFELA KDKIMMGAER KSMVMSEKEK QNTAYHEAGH 420
  421 AIVGRVVPEH DPVYKVSIIP RGRALGVTMF LPEEDRYSLS KRALISQICS LYGGRIAEEM 480
  481 TLGFDGVTTG ASNDIMRASQ IARNMVTKWG LSEKLGPLMY AEEEGEVFLG RSAGSQHASL 540
  541 SAETAKLIDS EVRSIIDQCY GTAKQILTDN RDKLDAMADA LMKYETIDAD QIDDIMAGRT 600
  601 PREPRDWEGG SGTPPPVVQN ERPETPIGGP AADH

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle