YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|86750065, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.86
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTDRRIPDWA MRAWERFTLY GLIALGSVIG GLSRYLVGVA QLALVGPPFP WAILFVNVTG  60
   61 SFIIGFYATL TGPDGRIFAG TRQRQFVMTG ICGGYTTFSG FSLDTLQLIH HGHRAAALAN 120
  121 VAASPVAWLI AVWVGYAVAT RLNRLRTVAA TGAEAENLQI PRHATLLRIF VDESDQHDGM 180
  181 PLYEAIVLKA REMQLAGATV FRGPAGYGQS SQMHLANALG VPDTLPLIIE IIDGEDAVSR 240
  241 FLPALDEMMP GGMVTMEKVE VLQYGRPAGR

Type	Start	End	Confidence
Cytoplasmic	1	16	0.97
Transmembrane Helix	17	38	0.91
Non-Cytoplasmic	39	48	0.82
Transmembrane Helix	49	70	0.92
Cytoplasmic	71	85	0.87
Transmembrane Helix	86	108	0.86
Non-Cytoplasmic	109	115	0.82
Transmembrane Helix	116	137	0.93
Cytoplasmic	138	270	0.97