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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|87162521
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.54
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MASKPGILTN WPWKPLGSFK FVILIPWIGH SIYSFIWVER DPIQYLICPF ILVRMLHNQI  60
   61 WISISRYETA RGKSKIVDKS LEFEQVDRET NWDDQILFTA LLYYIGYMIF PMASNLPWWR 120
  121 IDGVILTAIL HAGPVEFLYY WLHRALHHHY LYSRYHSHHH SSIVTEPVTS VAHPFAEHLS 180
  181 YFTLFAIPML TTLFIKKSSV AALYGYVFFI DFMNNMGHCN FEFFPKKLFS YFPQLKYLSY 240
  241 TPSFHSLHHT KFRRNYSLFM PMYDYIYGTV DKSTDVIYET SLMRPKESPD VVHLTHLTTF 300
  301 NSIYQLRLGF ASLASNPQTS KWYLHLMWPF TMFSMLMTWI CGRAFVLESN SFKNLKLQCW 360
  361 LIPRFKRQYF SKWQSKTFNN LIEEAIVEAE LNGAKVISLG LFNKNHQLNE RHEHYIGRLP 420
  421 QLKIKVVDGS SLAAATVLNN IPKGTNQVLL RGKFNKVAFV IANALCKKNV QVVVLYKDEL 480
  481 KELEQRINTS KGNLALSPFN TPKIWLVGDE WDEYEQMEAP KGSLFIPFSH FPPKKMRKDC 540
  541 FYHYTPAMIT PTTFMNSHSC ENWLPRRVMS AWRIAGIIHA LEGWNVHECG DTILSTEKVW 600
  601 EASIRHGFQP LKNILTN

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle