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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|74355968
Protein type: Globular with Signal Peptide
Type Confidence: 0.97
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGSSSPPTRR NRAPSSVFSL SLIFLCLLDS SNAQSTPVFA CDVAGNPSLA AYGFCNTAIK  60
   61 IEYRVADLVA RLTLQEKIGV LTSKLHGVAR LGIPTYEWWS EALHGVSYVG PGTRFSGQVP 120
  121 GATSFPQVIL TAASFNVSLF QAIGKVVSTE ARAMYNVGLA GLTYWSPNVN IFRDPRWGRG 180
  181 QETPGEDPLL SSKYASGYVK GLQETDSSDA NRLKVAACCK HYTAYDVDNW KGVERYSFNA 240
  241 VVNQQDLDDT YQPPFKSCVV DGNVASVMCS YNKVNGKPTC ADPDLLSGVI RGEWKLNGYI 300
  301 VSDCDSVDVL YKNQHYTKTP EEAAAISINA GLDLNCGYFL GDHTEAAVKA GLVKEAAIDK 360
  361 AITNNFLTLM RLGFFDGDPK KQIYGGLGPK DVCTPANQEL AAEAARQGIV LLKNTGALPL 420
  421 SPKTIKTLAV IGPNANVTKT MIGNYEGTPC KYTTPLQGLA GTVHTTYLPG CSNVACAVAD 480
  481 VAGSTKLAAA SDATVLVIGA DQSIEAESRD RVDLNLPGQQ QELVTQVAKA AKGPVFLVIM 540
  541 SGGGFDITFA KNDAKIAGIL WVGYPGEAGG IATADVIFGR YNPSGRLPMT WYPQSYVEKV 600
  601 PMTNMNMRPD KSNGYPGRTY RFYTGETVYA FGDGLSYTKF SHSLVKAPRL VSLSLEENHV 660
  661 CRSSECQSLN AIGPHCDNAV SGTGGKAFEV HIKVQNGGDR EGIHTVFLFT TPPAVHGSPR 720
  721 KHLLGFEKIR LGKMEEAVVK FKVDVCKDLS VVDEVGKRKI GLGQHLLHVG DVKHSLSIRI 780
  781 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle