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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|71277921, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.96
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MHTFKVTATC LLTLGLSISG CNSQNNNADN ENKTSSAPEE WVSNPVDYVN PFIGTEGVYN  60
   61 HRQAANVVPG AVVPHGMFNF GPEHAYTKDL LKESERMTKQ VLGEKGRIPV GPGGYNYGAS 120
  121 RIKGFSFTRL SGTGCLGASG DIPVLPFTSA IKHSPDTDML DAYYSAGFTH QNETATPGYY 180
  181 QVKMDNGVDV ELSATTRTGI ARFTFDNPEQ AKLLFRSSYS QLGSGDAYTK IDQEKGEITG 240
  241 HVTSGNFCGY LGEFNRRDYY TLHFVAKLDV PISGTGGWQD DTVTKNSDSA KGGMGYGEKG 300
  301 IPKLGKGSGA WVDLDLSQQK TVTMTVGISY VSLANARENL AKEQTETLVN SSQTKEKYFE 360
  361 EVRKEAYQTW NKTLEKVKVV STNKDKLTTF YTALFHSQFH PNVFSDVNGE YLGFDQKVHK 420
  421 INNKQKAQYA NFSGWDVYRS QLQLVTLLDA TRGSDIAQSL YNQAQQYNGV WDRWTHNSGA 480
  481 TGVMSGDPST IAIANFAAFG ATGFDIKGAY QSLLKAANEP TSFDLSDEGC PVFCRGQHPS 540
  541 LDQWQSINYI SDQSNSWEGA SETLEQASAD FALSQLASKL GDNASSQALL TRSGYWKNLF 600
  601 NPQATKEAGY IQGRNKDGTW KADFDANSEH LFVEGSPAQY LWMIPFDGNG LKEMVGGDKV 660
  661 MANRLDNHFH KPDGSWVLFR DSATYSDVSN QPSIASPWMY LFTGQAYKTQ DTVRATIDLL 720
  721 WNNTTKGIPG QDDLGQMSSW YVFSALGIYP LLPGRADMVL ASPIFSKTKI GNLTINAPNT 780
  781 SSENRYITSL KVNNIDSSKS WIDDSYISAP VKLDFELSSV PNTQWGAKTA DRPLSFSTDN 840
  841 SAVGDK

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle