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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|71278657, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.65
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDIIIWLIVA LTLTWFMSYT RASLSSFTLC FAALMALGSL FNIIGIVSWL LFAVIALPIN  60
   61 IDNIRQQFIS MPLLAIFKKI MPQMSSTEQE AIDAGTTWFD ADLFRGDPDW LKLHNYPRPR 120
  121 LSSQEKAFLD GPVEQVCAMV NDWHITHEIA DLPPEIWQFL KENKFFAMII KKQYGGLEFS 180
  181 AYAQSRVLQK LTGVSSVLAS TVGVPNSLGP GELLQEYGTK EQQDYYLPRL AKGEEIPCFA 240
  241 LTSPEAGSDA GSIPDYGVIC HGQFNGEDVL GMKLTWDKRY ITLAPIATVL GLAFKLQDPD 300
  301 NLLSEQEDLG ITCALIPTDI EGITIGRRHF PLNVPFQNGP TQGKDVFVPL DFIIGGSDMA 360
  361 GQGWRMLVEC LSVGRAITLP SNSTGGVKTA ALATGAYSRI RRQFKMPIGK MEGIEEPLAR 420
  421 IGANAYLMDA VTTMSTGAID LGEKPSVISA IAKYHLTEKM RSSIIDAMDI HGGKGICMGP 480
  481 NNYLARGYQG APIAVTVEGA NILTRSMIIY GQGAIRCHPY VLAELEAANN SDNEQALNDF 540
  541 DHALFGHIGF SLSNISRSLW CSITGSRFLG SPYDDGTRRY YQLLTRFSAN LAMLSDISML 600
  601 SLGADLKRKE RISARLGDVL SQLYLASATL KRYNDEGRNT ADLPLVQWAV EDCLYNIQHA 660
  661 IDELISNFPN KIVGKLLRVI IFPLGTWLKK PNDETSHKVA QLLQTPGSAR TRLGQGQYLT 720
  721 RDGNNIFGRL EQVLEDIISC EPIYEKVCRE LNKKLPFYHL DKVAELGLTN NIISKVEAEL 780
  781 LTTAEVGRQW VIAVDDFDSK DMTAFSGSA

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle