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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|71279757, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.76
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQESKPSVMD IFVRRPVVAI VLSIIICIAG IWSASKIPVL QFPKIDSASL VIETYYIGAS  60
   61 ADVVKGFITE PIERAAATVP GVEYVDSTST SGSSKVTAWL KLNENSTLAL AELTARLGQI 120
  121 RFELPQGAQD PVVSVSRADR PFAVFYLNVQ ANGNDLSRIT DYLTRQVNPV LNAIEGVQRV 180
  181 GIEGARTPAM RVWLNAQALQ IFNLSASDVY QALATNNTIA TMGYVENSRQ KIDIVANTQL 240
  241 SSVEEFQQLV ISEVDGATIH LKDVAKIELA AEDTSVTARL NDKDAVYISI WPLPGANEIA 300
  301 IGDRLYEKVD ELNKTLPHGI SIDYAYDGTL YMRDALKEIF TTLAETVILV GLVVVLLMGS 360
  361 FRSAIVPLIT IPISILGAIA AMGIMGFSLN LLTVLAIVLS VGLVVDDAIV VVENVARLMR 420
  421 QGLSKFDAAL ISSRQLLVPI ISMTLTLAAV YAPIGFLSGL TGVLFKEFAF TLAIAVIISG 480
  481 IVAITLSPIM SAYVSPKGGE ESWLTTKVNH LFERLQRRYG QLLTHIFKWQ GQVFLIALVV 540
  541 SLLTVPFYLY SKKELAPIED QATVMFVIQS PPDASMAYNV AQMNPVVESL QEIEGGKKIW 600
  601 QIIFGGGGFG GLELVNADKR DYSAQSLVPQ IYGKLSQIPG LNMFPILPSS LPSSGQFEIE 660
  661 MIVKATAPYS EMKQYADQLV GAAFSSGKFL FADTDLKIDL PQVELQLNRE KIADLGMNVG 720
  721 EVSEQLGILL SSNFVNRFDA NGKAYRVIPI VNDEVRSKTE AILSLDIKLP TGELLPVSAV 780
  781 ADLKWKTVPR QLGTFAQQAS FRIYGGVAPG SNKEAALSAI EDAAKEILPL GYSIDYAGES 840
  841 RQLRKEGNTL VMVLGISLLI VFLVLSIQFN SFRDPLVVLL GCVPLALSGA LLIPYIELTT 900
  901 INIYSQIGLI TLIGLIAKNG ILIVEFANHA QELGANKLAA VTEAATTRLR PILMTTAATI 960
  961 LGHFPLVLVT GAGAEARNSI GIILVAGMFI GTIFTLFILP SFYLLLAEKR DKLMLDEIQV1020
 1021 SDEALQKVHS 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle