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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|71279758, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.66
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSSSDLKTNE KNDSENLNRP HDDIDTNKGI IAWFARNTIA ANLLMVFILI GGGLTALTIN  60
   61 KQMFPQLEFN WISYAAPYPG AAPQEVEEGI TIKIEEALKS VQGLKRVITY SNRNYSNGWF 120
  121 EVELDYDPQV VLEEVKSAID AIPSFPEGME RIKVEREKFR QEVMYISLYG DLTNGELKEL 180
  181 GRKIHNEIQQ LPGISISELY SGLAYEISVE VSKDKLREYG LSFRDVANAV RSFSRNMSAG 240
  241 QIRAANGYIN LRVENQAYRG HEFAQIPVVT LEDGTKVMLG EVATINDGFE EGLQYSKFNG 300
  301 ENSITIFVGA SENQSITKIA DIMNNYVDEK ASVLPQGVKL ETWVDLTYYL NGRLNMMLDN 360
  361 MKSGAVLVFL MLALFLRVRL AFWVMMGLPV CFLGTLLFMP MEFIGVTINV ISLFAFILVL 420
  421 GIVVDDAIVM GESAHDEIEE HGHTTDNVIR GVKRVAMPAT FGVLTTIAVF LPFLFGEGPS 480
  481 SAFGKAIGGV VVLCLIFSLI ESKLILPAHL VKMKVKKFNP RNPLDRLRAW IDTKLKNFIE 540
  541 NVYRPALIKF IEYRYAVLMF FISLMLLSAG LFGGGLVRYV GQPKIPHDFP RINVEMNIDA 600
  601 SEKSTLNTLL NIESIIHKID QDIEKQYGNS MIADMQVELR SRTNGQVMVK LVIPKERAIN 660
  661 TFELADLWRK AIPDYPGVKS LTISDNFFGG GRDDGDIAFR LESQDDAQLM AAAQELKLKL 720
  721 NSLKGVGDVN DSRQTSAKEV QFSLKPLAYS LGLTLEDIAS QVSYSFYGLE AQRILRDSEE 780
  781 VKVMVRYPLE QRSSVGHVDD VMIQAPNGAE LPLSELAEIN LTDGVTRIRR ENGNRTINVW 840
  841 ASVDAEQVEP FEVAKDVRDN FIPDLLRKYP SVKSEVSGRI QEEMDGAAEQ MRDLMISIMI 900
  901 IFSLLAIPLK SYSQALMILT VIPFGVIGAV FGHMILGLDL SVLSMFGIAA ASGVVVNDSL 960
  961 VMVDFVNKAR QRGERLKDAV IHAGTKRFRA IMLTSITTFI GLVPIIFFET SAQAQIVIPM1020
 1021 AVSLSFGVLF ATVVTLVLIP SLYLIIEDIK KVFSRNKNKK LVEGAVTAKE LASN

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle