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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|71279848, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.71
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKYLSNDMST LKKTSRDWAL NTVAVISLLT AMPMLTHAEE SSAIQVNDVT QWVDPFIGTG  60
   61 GDGHTFPGAV VPFGMVQLSP DTAAVSRGSD PQSEIYKHSA GYHYDDKTIT GFSHTHFSGT 120
  121 GHSDLGDLLI MPMTGKAHVE AGSETDPDSG YRSRFNHNAE KASPGYYSVE LSDYKIKAEL 180
  181 TTTARTGMHR YTFKENEQAH VLLDLTASIY NFKNKVIWSD VRVIDNQTLL AYRSTNGWAK 240
  241 QRDMYFAIKF SRPFDSIELI NQDNSRYRCN GCLTKKGSKP STIVNSAIQY TAGKAIKVLT 300
  301 HFKDANTEPL MVKVGLSAVS RKNALENLIT ENPGWDFDDV KLQAKKQWQE QLSVVQAKGK 360
  361 KSEKRQLYTA LYHALQAPSI YQDVNGQYRG VDGEIHQADG FENYTLFSLW DTYRALHPLL 420
  421 TYIAPDKVPN MINSMLAHYQ QSYDNMLPIW SFQAHETWTM IGYHAVSVIA DAYLKGIRDF 480
  481 DSELALKAMT DTANNPKYDA IPEYIKRGYV PMDKLSESVS ITLEYAYNDY TIARMAEAMG 540
  541 KKYIAKTFYQ RAQSYKNLFD PSVGFMRGKN SEGVWNPDFD AEDAKLMGPF TEGNSFQYTF 600
  601 YVPHDVNTLI DLIGGDKAFE ERLDLLFNKE LSHEKIKEHE DIAGLIGQYA HGNEPSHHIA 660
  661 YLYNYAGKPW RTQERIRQIM DTLSSDQPDG LAGNDDVGQM SAWYVFSAMG FYPVAPGDLS 720
  721 YAIGAPQLPE ISLNLANGKT FTVKANKLSK KNKFIKSARL NGKPLNRSFI THDDIINGGT 780
  781 LTFVMSNIPN KHWGIETKNR PTSMSTH

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle