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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|71280164, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.98
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQKVWTTNGR LSRRYSLSMP SLSLLMLSLI VLVSMAIEAA EFQAQYTPNI EDNTSTMSSV  60
   61 TLFKQGDFTQ LKKRTLPRDF LNALQAVIIH NPALKGQQAA LNSYEADIDS AKARRYPTLS 120
  121 AQANNLNNDA DQGTLRLNQP LWAFGKIDTA IDEATANYTA EQWGLIQNQR ELISDTAKIY 180
  181 AKIQGIKLRI TVAKQNIKEH ENLHGRISRR QQGQLASNAD TRLAYSRLLQ ARSRLQRIMG 240
  241 EELVAQAELQ ALTQIRVSTE GAIDDSLLGL PDRLVVNKLV MKNDANIRYK REQLKVVRLN 300
  301 LKQEKVASLP TISFRVEYDF LDNDINVDQT RAGLVFESNM EGLGLVSAGR VNAAAARLNA 360
  361 ADEEVKSALN DVRRQVNVLM INRGVQRDLM RSQKDIVDEV EATMASFLRQ YNSGRKSWVE 420
  421 VLNNQRELTE LRLQLVQIAS DWQQLSLQLL TLMGTLDDPA GLKHYEQ

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle