YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|71280175, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.93
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MMKHTKNLIS FSLAFLIICA SILAKPVQAR VLVVASDEWC PYICDDTHLP GFLVEIVTEI  60
   61 AASNGVKVKF SLTPLARALD LTKKGKIDIL LGLTSQHIGD FQLKKSHLTF GGLYNDFYVR 120
  121 ASDPWRFKSI ADLEVALKSN AILGTINGYE YGDSIGRLLK DNTAHIFSAS GNSPLQKQLK 180
  181 MLHLGRLDIL LDSRFTVQYQ LSKLLRKSAQ LKISTRSEPS IVYAGTEGIF TPLFLGFSPL 240
  241 LSKKYVQLFD NGLTSLRENG RLNKILEKYG VTDWHQQSVT FQDEELSLLL EG

Type	Start	End	Confidence
Signal Peptide	1	29	0.96
N-region	1	20
H-region	21	26
C-region	27	29
Cleavage Site	29	30
Non-Cytoplasmic	30	292	0.98