YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|71147515, gi|...
Protein type: Transmembrane
Type Confidence: 0.60
Topology Confidence: 0.51
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MIAWFARNHV AANLLLITIL IAGLFSLSNR IPLEVFPSFA TDRINVNVSL RGATPEDVEK  60
   61 SISIRIEEAV QDLEGVKQIA SRSQEGSSAV NIEVESGYDP REMLADIKSR VDEINTFPAD 120
  121 AEKPVVSLAT RKREVIAVTI ASIYSEKETR EFAEKVRDDL LKIPAITQVE LSGVRDYEIS 180
  181 IEVPQDKLRQ YDLTIAKISS AISDSSTDIS AGNLKTKGGD ILLRSKGQAY RKDEFEKIAI 240
  241 KTNVDGSIIR LSDIAIIKDD FEETPVRTRF NGKQAAFIDV YRIGQQSAID VADAVRTYIN 300
  301 DQQSTLPVGV ELSFWDDDSQ IVKNRISTLT TSALQGGILV LALLTLFLRP SIAFWVFIGI 360
  361 PISFMGAFIM MPVFGVTLNI MSLFGFILVL GIVVDDAIVT GENIYTHLKT SESGEMAAIR 420
  421 GTEEVATPVT FGVLTTVAAF LPLAFIEGAR GALFAQIPVI VIPVLIFSLI ESKFVLPSHL 480
  481 KHLKLRSEKE KQSKFSQLQQ SFADGFEQAI IRFYQPLLKR AISNKTTTLV GFVGVFLVIL 540
  541 ALIMSGWTKF IFFPRIPSET VRATLTLPAG TPFEVTNKYI IKMAEKADEL KQKYIEPSTN 600
  601 SSVIINILAT TGGRGGASNS GSVRFEITPP ESRELAISSS ELVREWRNLI GPIPGSESIT 660
  661 FRAEIGRSSD PIHVQFKASS LDTLKEITDK VKLRLATYPT VFDIADSLSN GKEELQIELT 720
  721 EQGKALGLTR VSISNQVRRS FFGSQVQRIQ RGRDDVRVMV RLPIEERRTM ADLEDILVVT 780
  781 PSGGSVPLSH VAKLIPGKSP STISRIDRYR TANVSADVEK SNTNMTVLQA DLKSYLDELI 840
  841 VQYPGVSHSL EGEAKEQRES FGSLGWALGF VFFIIYALLA IPFKSYIQPI IVMSIIPFGM 900
  901 IGAVIGHWIM GMELTIMSLL GMLALIGVVV NDSLVLVDFI NKKRSEGGEL MEAVLTAGAA 960
  961 RFRPVMLTSL TTFIGLMPLL FEQSTQAQFL IPMAVSLGFG ILFATFITLI LVPVNYLIVE1020
 1021 RLKSLFSSES PIDQQNIAAQ A

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle