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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|71148052, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKALNKKSNK TLNLTLKLTS LAVLAALAGC DGSDGTSGDN GTQGTSSLIS QTLVTVGHEQ  60
   61 CLNGGVQIDS GLDSDSSGIL DAGEITTTEF VCKPTVTQMQ GSSLTATTNN LWYEQGQNIL 120
  121 GQAQLNAKSL VNARGKAKNV ILFVGDGMGL STVTAARILA GQQLGKLGEE HELSFDKFPY 180
  181 SGFAKTYNVD AQTPDSAGTM TAMMSGVKTD AGVIGVAEAI KRGDCATASG NELVTALELA 240
  241 EIAGKSTGII STARITHATP AATYAKSAER NWEDISDMPA TAIAAGCVDI ASQLISFESD 300
  301 IESRFSGTDV DGIDVVLGGG RRHFLPKDAA YNTADATSSV EGDRTDGRDL TAEWQAQYPT 360
  361 GSFVIDQAGF DAVDSNATQR LFGLFNESHM QYEADRKNDI SGEPSLREMT NKAIDILDNN 420
  421 KEGFFLMVEA GRIDHGHHAG SAHGALTDTI AFADAVQTAV ENTDPEETLI IVTADHSHVF 480
  481 TMAGYPKRGN PILGKVVSVG KTEPSLAKDG MPYTTLGYTN GKGFRDLGSE TDADEGYNGD 540
  541 AITGRQDLTL VDTNSAGFHQ ESLVPRGSET HAGEDVGIYA MGPGAHLITG TNEQSVIFHV 600
  601 MDYAADLVKK AEKAMN

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle