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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|71282530, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNKTIIALSI SSLLYSSLSF AEQTSPTTID KADETIVITA NRSIQDKFDT LASVNIFTRE  60
   61 NIEQIQPLSI SDLLGRVAGI SINTQGTSAH KTSAFVRGTN SDHVLVLVNG VRIGSATLGS 120
  121 KSLASIPVQL VERVEVIKGP RAALWGSDAI GGVIQIFTRD LAAGEGQVGI KVGSDSLYQG 180
  181 YGALGFGNKE HGYTLSATAE KSDGFDVVVP DGNSQYTVDQ NDDDGYDRQS IALSGTSQFT 240
  241 QAYALELNTQ YDQGTTEFDA NTKYGGDETT YENYHFLLRN HLQLEQVYLQ LGLSTSEDST 300
  301 EDNYSKYNSQ NSASNANSLF TTNREQVTAL AQLPLADSSE ITAGFEWYTE SIESNKEYDE 360
  361 TDRDANAVFV TGRHDIEQVK LEASVRYDKV GDIDSETTYQ VAAGYQVNDQ LLFSLSHGTA 420
  421 FKAPSFNDLY YPWQGNPDLI SETADTSEFL ARFQNDTLSA EVSIYQSDID NLIEWAPTAS 480
  481 GAYKPSNVAK AKILGAEATF TAAIYNTNNT LTLSHVDAED KTTDHQLARR PNFSANYNFV 540
  541 YSLKQFDFTF DVDYQGSRYD GANDPVKTLK AFTLLDVGLN YRLNNQVSLL AKVTNLTDKD 600
  601 YQTSSEYPGS ERGYTLTVDY KF

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle