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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|71906578, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.49
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPKRTDIKSV LIIGAGPIII GQACEFDYSG AQACKALREE GYKVILVNSN PATIMTDPEM  60
   61 ADVTYIEPIT WQVVAKIIEK ERPDALLPTM GGQTALNCAL DLDREGVLAK FNVELIGASK 120
  121 EAIDKAEDRQ KFKDAMTKIG LGSAKSATAH SMEEAYQVQA VIGFPTIIRP SFTLGGTGGG 180
  181 IAYNMEEFEI ICKRGLEASP TNELLIEESL LGWKEYEMEV VRDKADNCII ICSIENLDPM 240
  241 GVHTGDSITV APAQTLTDKE YQILRNASIA VLREIGVDTG GSNVQFSINP KDGRMIVIEM 300
  301 NPRVSRSSAL ASKATGFPIA KIAAKLSVGY TLDELSNDIT GGKTPASFEP SIDYVVTKVP 360
  361 RFAFEKFPQA DSTLTTQMKS VGEVMAIGRT FQESLQKALR GLEVGVDGFN LKTVDPETID 420
  421 EQLARPTPDR LWYVADAFGI GMSVEKVFDL TKIDPWFLVQ IKEIVDLELA VEKREFSSLT 480
  481 AEELRYLKRK GFADRRLAHL TKTSETAVRE RRHELKVRPV YKRVDTCAAE FSTGTAYMYS 540
  541 TYEDECEAMP TDKKKIMVLG GGPNRIGQGI EFDYCCVHAA MAMREDGYET IMVNCNPETV 600
  601 STDYDTSDRL YFEPLTLEDV LEICAIEKPV GVIVQYGGQT PLKLALALEA NGVPIIGTTP 660
  661 ESIDIAEDRE RFQKLLHDLG LKQPPNRTAR TEEDALRLAQ EIGYPLVVRP SYVLGGRAME 720
  721 IVHEQKDLER YMREAVKVSN DSPVLLDRFL NDAVECDVDA LSDGEEVIIG GVMEHIEQAG 780
  781 VHSGDSACSL PPYSLSAAVQ DELRRQTKLM AKALNVCGLM NVQFAIKDND VYVLEVNPRA 840
  841 SRTVPFVSKA TGLQLAKIAA RCMAGRSLKD QGITKEIIPP YYSVKEAVFP FVKFPGVDTI 900
  901 LGPEMKSTGE VMGVGVTFAE AFVKSQLAAG VKLPKSGKVF LSVKDSDKAK AIEIARHLHD 960
  961 AGFHLAATRG TAHAIEAAGL PVQSVNKVTE GRPHIVDMIK NNEIALIINT VEEKRGAIND1020
 1021 SRSIRTSGLQ ARVTMYTTIW GAEAAAEGIR HLGELVVYPI QALHEQLH

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle