YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|72494614, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.76
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNKPNIALTI AGTDPTGGAG VMADLKSFHA CGVYGMVAVT SIVAQNTKGV QHIHNLEPQW  60
   61 LSEQLASVFD DELPHAIKTG MIASKEMMQL IQEYLVKYPE IPYVIDPVML AKSGDSLMDD 120
  121 DAKADLQNIL LPYATVATPN LPEAEEITGL KIDNEAAIYK AGNIFINEIG SKGVVIKGGH 180
  181 AEDLETAKDY LFTKDEVYTF EEPRYDTQHT HGTGCTFSAV ITAELAKGRT IYDAVKKAKK 240
  241 FISLSIKYTP EIGQGRGPVN HFAYMKKVGL DDE

Type	Start	End	Confidence
Signal Peptide	1	23	0.73
N-region	1	14
H-region	15	20
C-region	21	23
Cleavage Site	23	24
Non-Cytoplasmic	24	273	0.99