YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|115934484, gi...
Protein type:	Transmembrane
Type Confidence:	0.84
Topology Confidence:	0.75
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFLVGLTGGI ASGKSTVSNV LRDLGCVIID ADKIAREVVQ PGKPALKRIV RHFGKSVLRD  60
   61 DGTLDRAKLG SIIFADSEKR KILNRCTHPY IQRTMLWEVL TSFLSGHHYV ILDVPLLLDG 120
  121 SALRRFIKYV LVVYCDEATQ LDRLMSRNDL TQEDALQRIN SQVPLEIKKK QADFVIDNNG 180
  181 SLTATKQQVL ELYERLEGSY AHWKLRSFLL GSLVLLGGGA YKLYSFL

Type	Start	End	Confidence
Cytoplasmic	1	204	0.75
Transmembrane Helix	205	224	0.78
Non-Cytoplasmic	225	227	0.77