YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|74140405
Protein type:	Globular with Signal Peptide
Type Confidence:	0.84
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSLTGLKGHW VLGHGLSVFL LVLLLLGPSQ PLIWTQTKPG FSGASTTSSI PRALTKPDIS  60
   61 SIPTTPGNPN FPDLRDRTRA LMQEFPLIDG HNDMPLVLRQ FYQNGLQDAN LRNFTHGQTS 120
  121 LDRLKDGLVG AQFWSAYVPC QTQDRDALRL TLEQIDLIRR ICASYSELEL VTSVKALNST 180
  181 QKLACLIGVE GGHSLDNSLA VLRSFYLLGV RYLTLTHTCN TPWAETSSKG VHAFYSSVTG 240
  241 LTSFGEKVVA EMNRLGMMVD LSHVSDAAAR RALEVSQAPV IFSHSAARAV CPNARNLPDD 300
  301 LLQLLKKNGG IVMVTFSVGV LPCNPLANVS TVADHFDHIR SVIGSEFIGI GGDYDGTKQF 360
  361 PQGLEDVSTY PVLIEELLRR GWNEQELQGI LRGNLLRVFR QVEQVRDKSK WQSPLEDMIP 420
  421 EEQLDSACHS ALRPQKQHPE KNQPETPEYH ILKFSHSKSS PHIVPSLAIV ATLLGLIV

Type	Start	End	Confidence
Signal Peptide	1	31	0.93
N-region	1	22
H-region	23	28
C-region	29	31
Cleavage Site	31	32
Non-Cytoplasmic	32	478	0.99