YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|88194400, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.78
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVGGMCLMEI TKEIFSLIAA VMLLLGSFIA LISAIGIVKF QDVFLRSHAA TKSSTLSVLL  60
   61 TLIGVLIYFI VNTGFFSVRL LLSLVFINLT SPVGMHLVAR AAYRNGAYMY RKNDAHTHAS 120
  121 ILLSSNEQNS TEALQLRAEK REEHRKKWYQ ND

Type	Start	End	Confidence
Non-Cytoplasmic	1	13	0.78
Transmembrane Helix	14	38	0.89
Cytoplasmic	39	52	0.66
Transmembrane Helix	53	71	0.90
Non-Cytoplasmic	72	79	0.52
Transmembrane Helix	80	99	0.81
Cytoplasmic	100	152	0.82