YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	PSD_ANAPZ
Protein type:	Transmembrane
Type Confidence:	0.98
Topology Confidence:	0.55
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MCFPNIHKQG YPFIAIAFVL TCIGFAFSFG LGLVFQIITV LCACFFRNPD RIVPVDDKLI  60
   61 ISPADGLVTS VAEVESPIEA GKMVTRVSVF LSILNVHVNR APVSGSVKLV EHRPGRFSPA 120
  121 CTDGSTSENE RVRSVIESTF GNHNIVIEQV AGVLARRIVC DLKVGDNVKL GSRMGIIRFG 180
  181 SRVNVYVPAG VPVLVTEGHT LVGGETVIAD LDSERTAGYP RATFEKV

Type	Start	End	Confidence
Cytoplasmic	1	12	0.55
Transmembrane Helix	13	38	0.85
Non-Cytoplasmic	39	227	0.62