YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|88607263, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.98
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKTFKTVSNL LLLVATVFLG YSYVNKKGIF SDMGAKLSST DTVVEQAPIL ASFTDLINQE  60
   61 GQVVSSTDFA GKHMLLMFGF SSCKHICPAE LGMVSQLLNK LGETADKLQA VFITIDPKND 120
  121 TVERLNEYHK AFDSRIQMLT GDEEVIRNVV NNYKVYVGES DSEGDINHSS FLYLVDADGR 180
  181 YVGHFAPDFD EYESQVGRLF DFVNKYLNS

Type	Start	End	Confidence
Signal Peptide	1	22	0.95
N-region	1	13
H-region	14	19
C-region	20	22
Cleavage Site	22	23
Non-Cytoplasmic	23	209	0.99