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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|88598407, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.84
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MYSKLSGAIS FLKIDLSLTR LLGHNSLNKE KGGDSCNSKL LSGSLAILDG MTSFIFRLQK  60
   61 KRSGNEALKA SWGPLFIGIV AVIGFFGCFG IWAALAPLDG AVIAPGEVVS SLNRQIVQHL 120
  121 EGGIVKKILV TEGETVEKEQ PLVYLNSTAA QANLGIIKEK LLVLLATEAR LNAIKSHATT 180
  181 VEFPDEIFKL SSEDVVSKVL ENQKELFFSQ NNSITGQIQI LRQRIKQLHQ ELAGLASQLE 240
  241 AEEKQYHLID EELETKKSLL DAGYISKPYL LNLERLHANA EGKLGHIRAT IASTEQKIGE 300
  301 NRLEIINITN TVMDRANAEL KETASTITDL RERLRAAEDV LERTVIRSPQ HGIVTGLKYH 360
  361 TEGGVIPPGG VIMEVVPIDD DFIIDAKISI RNIEEILSAQ TVEENLVTSG EYRGLKAKVR 420
  421 LSAFNIRKFG LVNGIVTQVS ADALADPHGM RYYSLRVVIP KSSHSGKFKN LKLYHGMPAE 480
  481 VFVVTRSRTL LEYLLTPITS TFEKAFKER

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle