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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|88608009, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.78
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MIRSTDAPIE EKLKETILHK TLHKCKSVFW ILFWFSSGIN VLALFLPLYT SQVLDRVLSS  60
   61 GSTSTLMALT VITLCAFACS SVLDASRAMI TVKVGNWFDD TLTPGLLNNA IALISVRPGT 120
  121 SSGETMRDMQ IIRGFLTGNG VFAFFDAPWS ILYLVAIFLI NFTLGIVAIV GIVTLIGIAL 180
  181 LNDFATRNLA RQSNEANVRN LNEIEIATRN SEVVEAMGMI EPIVEKWSKK NALVRDTQTL 240
  241 ALSRSYIIMA FTKAVRFTLQ IAVIGIGAYL AISGHKTAGG IIAVSILMGR ALAPFEIAIS 300
  301 NWKNLSQAKT SYGRLQNMLI TSPVRSQAMK LPEPSGEIEF DRVIYTPLGG SKPTIKGVSF 360
  361 TIPAGKVVGV VGSSAAGKST IARLTVGVLK PIAGVVRLDG ADTYTWERKH FGKHVGYLPQ 420
  421 DIELFNATVK ENISRFNPDI DPAEVVRAAK IAGVHEMILH LPNGYDTVIG AGGSVLSGGQ 480
  481 RQRIGIARAF YGNIKLLVLD EPNANLDSSG EAHLAKALRY AREARITTLL MTHNFSLLSE 540
  541 VDWLMLVKEG TIAFLGEKDE IIKQLSIGTK EQSSESN

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle