YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|88600229, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.97
Topology Confidence:	0.73
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRCVVRSWLA QRITALLLFL LFIFLLFSLR SSKWIFPFDV EYLSCHWGVL LVFAMFVLIA  60
   61 QCHALLGLNV IIEDYIASSI LRKVLVSLNI IFVGSTLFAF VAVFYRLFF

Type	Start	End	Confidence
Cytoplasmic	1	7	0.96
Transmembrane Helix	8	29	0.86
Non-Cytoplasmic	30	46	0.82
Transmembrane Helix	47	71	0.85
Cytoplasmic	72	83	0.90
Transmembrane Helix	84	105	0.92
Non-Cytoplasmic	106	109	0.73