YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|88599231, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.98
Topology Confidence:	0.83
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDTIPQLDIT SYPSQLFWFF LSFGILYFLI SKNIIPKLEN VLKKRYTVTI DSVDCVENNL  60
   61 ILAQDELKKQ LSNLEEAKAE ADRIISSALQ EVKRTNADLI VLLNEEIQGM FSIADEYMHN 120
  121 LKRQTEQELI DLTCEIASMY YNKMLGTAEY VDKDKLRDIT TRLYKEKI

Type	Start	End	Confidence
Non-Cytoplasmic	1	15	0.83
Transmembrane Helix	16	35	0.91
Cytoplasmic	36	168	0.87