YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	ATP6_EHRCR
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.68
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSANPLDQFK ISTIFKLPSI GGYNIDFTNA SLFMVLSTLI ISLFCYIGLR KENILPNSMQ  60
   61 LIIEAIYNFI VSTIESNVGR KGLQYIPLVF TIFTFIATCN LLGVLPLGFT VTSHIAVTFA 120
  121 ISMVVFISVT AIGFKHQGIH FLRILLPKGT PGWLAPMMVF IELFAYCARP VSLSIRLAAN 180
  181 MIAGHTIIKV IAGFVIKMNI FLTPLPMAFI IILIGFEIFV AILQAYIFTV LTCVYLSDAI 240
  241 NEH

Type	Start	End	Confidence
Non-Cytoplasmic	1	26	0.84
Transmembrane Helix	27	49	0.88
Cytoplasmic	50	84	0.80
Transmembrane Helix	85	107	0.89
Non-Cytoplasmic	108	113	0.64
Transmembrane Helix	114	134	0.93
Cytoplasmic	135	148	0.69
Transmembrane Helix	149	168	0.84
Non-Cytoplasmic	169	176	0.56
Transmembrane Helix	177	201	0.72
Cytoplasmic	202	206	0.57
Transmembrane Helix	207	228	0.88
Non-Cytoplasmic	229	243	0.68