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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|88599728, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.72
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEGVNFNFQT MKELKQSVLY TSLEKCKSVF WFIFWFSSAI NLLMLFLPLY TSQVLDRVLS  60
   61 SGSVSTLIML SVITVGAFAC SSILEICRSL VMAKVGDWID KVVTPDLIMK SISLTSVKSS 120
  121 TSSGEVLRDL AVVKNFITGF GIFSLFDTPW AVLYLVTIFM IHSVTGYIAV VGIVLLTGMA 180
  181 IWNELATKKI LQEASEEGVR NIHSIDVATR NAEVVEAMGM VNYIVDDWAD RNDRNREMQI 240
  241 KAQNRSNLIS GITKFIRSIL QISVIGIGGF LAILGHKTAG GIIASSILMG RALAPFEALI 300
  301 NTWKMLISAR ISYKRLQILL LASPKREQSM SLPAPSGRVV FDRVFFTPYG SNKPTIKGVS 360
  361 FSMEVGDIVG VIGHSASGKS TIAKLLVGVW KPISGVVRLD GADVYTWNRE DFGRYIGYLP 420
  421 QDVELFNASV KVNIARMMPD PDPNEVVKAA KIAGVHELIL SLPNGYDTVI GSNGVVLSGG 480
  481 QKQMLGLARA FYGNVKLLVL DEPNANLDGK SEANLINALL YARKNGITTF IMTHKIQLLN 540
  541 AVDKVIVMAD GMVSGVGARD EILSKVVPNY TPSNSQPKQQ TKPLVESENT 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle