YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|71051695
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.90
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 TAPVFFGCAF IAFGPALALY LFTIATDPLR VIFLIAGAFF WLVSLLLSSV FWFLVRVITD  60
   61 NRDGPVQNYL LIFGVLLSVC IQELFRLAYY RLLKKASEGL KSINPEETAP SMRLLAYVSG 120
  121 LGFGIMSGVF SFVNTLSNAL GPGTVGIHGD SPQFFLNSAF MTLVIIMLHV FWGIVFFDGC 180
  181 EKNKWYILLT VLLTHLLVST QTLLSPHYEV NLVTAYIIMV LMGIWAFCVA GGSRRSLKLC 240
  241 LLCQDKDFLL YNQRSR

Type	Start	End	Confidence
Non-Cytoplasmic	1	4	0.90
Transmembrane Helix	5	24	0.92
Cytoplasmic	25	31	0.80
Transmembrane Helix	32	55	0.91
Non-Cytoplasmic	56	68	0.87
Transmembrane Helix	69	90	0.90
Cytoplasmic	91	113	0.91
Transmembrane Helix	114	133	0.95
Non-Cytoplasmic	134	153	0.88
Transmembrane Helix	154	176	0.91
Cytoplasmic	177	184	0.89
Transmembrane Helix	185	204	0.96
Non-Cytoplasmic	205	211	0.84
Transmembrane Helix	212	232	0.93
Cytoplasmic	233	256	0.97