YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|73949184
Protein type:	Globular with Signal Peptide
Type Confidence:	0.83
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MARKAPAFHG ALAWSVRVRA HKVLLQREDE ARVSEGTVTT HNQTLVSSER CELLLQRRWD  60
   61 RGWDWPGAAL LPASSSAIDQ GPNAHDGFEP KQPRFQEGHC AGEMLMPAYL LLLLLLLPGI 120
  121 PQPGLSQKFH PGKSFFSCIN TALWEARQSP LEDAPLLSKR SFPYLPSQDP SSGEDEEKEE 180
  181 EEEDKKKRTF PGFGGGNGAV SARYKYLSPA QLKGRLHQDK AKSDRRTKFT LSLDVPTNIM 240
  241 NILFNIAKAK NLQAKAAANA HLMAQIGRKK

Type	Start	End	Confidence
Signal Peptide	1	20	0.86
N-region	1	11
H-region	12	17
C-region	18	20
Cleavage Site	20	21
Non-Cytoplasmic	21	270	0.94