YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|73949780
Protein type:	Globular with Signal Peptide
Type Confidence:	0.86
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAAAAAALSG ALGRAGWRLL QLRCLPVSRC QSAVVSRAFH ASTMQLKSSD EQKQQPSQSF  60
   61 SQQQSETHEA EEPNPESSRS PPRYTDQGGE EEEDHESEEQ LQHRILTAAL DFVPAHGWTA 120
  121 EAIAEGAQSL GLSSAAASMF GNDGSELILH FVTQCNARLT RVLEEEQKLV QLGQAEKRKT 180
  181 DQFLRDAVET RLRMLIPYIE HWPRALSILM LPHNIPSSLS LITSMVDDMW HYAGDQSTDF 240
  241 NWYTRRAVLA GIYNTTELVM MQDSSPDFED TWRFLENRIN DAMNMGHTAK QVKSTGEALV 300
  301 QGLMGAAVTL KNLTGLNQRR

Type	Start	End	Confidence
Signal Peptide	1	15	0.87
N-region	1	6
H-region	7	12
C-region	13	15
Cleavage Site	15	16
Non-Cytoplasmic	16	320	0.99