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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|73950244
Protein type: Globular with Signal Peptide
Type Confidence: 0.98
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLSGKKAAAA AAAAAAAAAA GTEAGPGAAG GAENGSEVAA PPAGLSGPAE AGPGVAGERT  60
   61 PRKKEPPRAS PPGGLAEPPG SAGPQAGPTV VPGSATPMET GIAETPEGRR TSRRKRAKVE 120
  121 YREMDESLAN LSEDEYYSEE ERNAKAEKEK KLPPPPPQAP PEEENESEPE EPSGQAGGLQ 180
  181 DDSSGGYGDG QASGVEGAAF QSRLPHDRMT SQEAACFPDI ISGPQQTQKV FLFIRNRTLQ 240
  241 LWLDNPKIQL TFEATLQQLE APYNSDTVLV HRVHSYLERH GLINFGIYKR IKPLPTKKTG 300
  301 KVIIIGSGVS GLAAARQLQS FGMDVTLLEA RDRVGGRVAT FRKGNYVADL GAMVVTGLGG 360
  361 NPMAVVSKQV NMELAKIKQK CPLYEANGQA DTVKVPKEKD EMVEQEFNRL LEATSYLSHQ 420
  421 LDFNVLNNKP VSLGQALEVV IQLQEKHVKD EQIEHWKKIV KTQEELKELL NKMVNLKEKI 480
  481 KELHQQYKEA SEVKPPRDIT AEFLVKSKHR DLTALCKEYD ELAETQGKLE EKLQELEANP 540
  541 PSDVYLSSRD RQILDWHFAN LEFANATPLS TLSLKHWDQD DDFEFTGSHL TVRNGYSCVP 600
  601 VALAEGLDIK LNTAVRQVRY TASGCEVIAV NTRSTSQTFI YKCDAVLCTL PLGVLKQQPP 660
  661 AVQFVPPLPE WKTSAVQRMG FGNLNKVVLC FDRVFWDPSV NLFGHVGSTT ASRGELFLFW 720
  721 NLYKAPILLA LVAGEAAGIM ENISDDVIVG RCLAILKGIF GSSAVPQPKE TVVSRWRADP 780
  781 WARGSYSYVA AGSSGNDYDL MAQPITPGPS IPGAPQPIPR LFFAGEHTIR NYPATVHGAL 840
  841 LSGLREAGRI ADQFLGAMYT LPRQATPGVP AQQSPSM

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle